Amycolatopsis methanolica 239

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis methanolica 239 is characterized by the presence of flagella, which suggests a capacity for motility. This trait may allow the organism to navigate its environment effectively, potentially aiding in colonization and survival in various ecological niches. The strain exhibits a single replicon, indicating a streamlined genetic organization. This can be an advantage in terms of replication efficiency and resource allocation, which may contribute to its adaptability in diverse conditions. The genomic information of Amycolatopsis methanolica 239 is cataloged under the accession number NZ_CP009110.1. This data provides a basis for understanding the genetic makeup and potential metabolic pathways of the organism, although specific metabolic capabilities or ecological roles are not provided. In summary, the presence of flagella and a singular replicon in Amycolatopsis methanolica 239 are notable traits that underscore its potential adaptability and mobility. These characteristics may play significant roles in its ecological interactions and survival strategies, although further research would be necessary to elucidate the full range of its biological implications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis methanolica
Strain239

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis methanolica 239 chromosome, complete genome.

Gene Summary

Adenine Count

1028183 bp

Thymine Count

1032505 bp

Guanine Count

2597107 bp

Cytosine Count

2579596 bp

Genome Length

7237391 bp

Protein-coding Genes

7360 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAMETH_RS28975Not AvailablePositive5961603 - 596232825390.2
l-glutamate gamma-semialdehyde dehydrogenaseAMETH_RS28980Not AvailableNegative5962325 - 596395358481.7
duf6912 family proteinAMETH_RS28985Not AvailableNegative5963983 - 596448317861.1
wax ester/triacylglycerol synthase family o-acyltransferaseAMETH_RS28990Not AvailableNegative5964480 - 596588650814.0
rna methyltransferaseAMETH_RS28995Not AvailablePositive5965917 - 596668125923.7
had-ia family hydrolaseAMETH_RS29000Not AvailableNegative5966659 - 596703912899.5
rv3235 family proteinAMETH_RS29005Not AvailablePositive5967142 - 596757615942.2
preprotein translocase subunit secaAMETH_RS29010Not AvailableNegative5967950 - 5970760105008.0
ribosome hibernation-promoting factor, hpf/yfia familyAMETH_RS29015Not AvailableNegative5970958 - 597164425721.5
comf family proteinAMETH_RS29020Not AvailablePositive5972323 - 597297622523.4

Displaying genes 6201 – 6210 of 7467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm00200023-Dehydroshikimic acidC7H8O5Chemical structure of 3-Dehydroshikimic acid27655-56-7
Average172.1354Da
Monoisotopic172.037173366Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.