Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excalibur calcium-binding domain-containing protein | AMETH_RS27980 | Not Available | Positive | 5755987 - 5756589 | 20461.7 |
| class f sortase | AMETH_RS27985 | Not Available | Positive | 5756586 - 5757215 | 21824.6 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | AMETH_RS27990 | Not Available | Negative | 5757302 - 5757922 | 23106.8 |
| nad(p)/fad-dependent oxidoreductase | AMETH_RS27995 | Not Available | Negative | 5757912 - 5758925 | 35118.6 |
| glutamate--cysteine ligase | AMETH_RS28000 | Not Available | Positive | 5759054 - 5760130 | 39467.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AMETH_RS28005 | Not Available | Negative | 5760117 - 5760722 | 20506.6 |
| iclr family transcriptional regulator | AMETH_RS28010 | Not Available | Negative | 5760709 - 5761464 | 27589.0 |
| sugar kinase | AMETH_RS28015 | Not Available | Negative | 5761464 - 5762363 | 32108.9 |
| helix-turn-helix domain-containing protein | AMETH_RS28020 | Not Available | Negative | 5762440 - 5763243 | 29524.1 |
| duf3224 domain-containing protein | AMETH_RS28025 | Not Available | Positive | 5763305 - 5763700 | 14108.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
