Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3817 domain-containing protein | AMETH_RS27750 | Not Available | Negative | 5706983 - 5707345 | 12906.1 |
| laci family dna-binding transcriptional regulator | AMETH_RS27755 | Not Available | Positive | 5707630 - 5708613 | 34879.7 |
| class i mannose-6-phosphate isomerase | AMETH_RS27760 | Not Available | Positive | 5708610 - 5709635 | 36544.8 |
| atp-binding cassette domain-containing protein | AMETH_RS27765 | Not Available | Positive | 5709635 - 5710402 | 27452.2 |
| abc transporter permease | AMETH_RS27770 | Not Available | Positive | 5710399 - 5711433 | 35597.1 |
| abc transporter substrate-binding protein | AMETH_RS27775 | Not Available | Positive | 5711466 - 5712440 | 33089.1 |
| short-chain dehydrogenase | AMETH_RS27780 | Not Available | Negative | 5712486 - 5713199 | 24356.2 |
| carboxymuconolactone decarboxylase family protein | AMETH_RS27785 | Not Available | Negative | 5713196 - 5713486 | 10694.7 |
| short-chain dehydrogenase | AMETH_RS42235 | Not Available | Positive | 5713612 - 5713671 | 2172.66 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | AMETH_RS42240 | Not Available | Positive | 5713808 - 5714119 | 10958.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
