Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | AMETH_RS02345 | Not Available | Positive | 452415 - 454079 | 59466.5 |
| m1 family metallopeptidase | AMETH_RS02350 | Not Available | Positive | 454324 - 455823 | 53931.4 |
| duf3592 domain-containing protein | AMETH_RS02355 | Not Available | Positive | 455848 - 456333 | 17235.0 |
| dihydrofolate reductase family protein | AMETH_RS02360 | Not Available | Positive | 456356 - 456919 | 20737.6 |
| zinc-ribbon domain-containing protein | AMETH_RS02365 | Not Available | Negative | 456916 - 457269 | 13242.0 |
| inositol monophosphatase | AMETH_RS02370 | Not Available | Negative | 457305 - 458150 | 29370.7 |
| glycosyltransferase family 1 protein | AMETH_RS02375 | Not Available | Positive | 458294 - 459415 | 39873.4 |
| glycosyltransferase | AMETH_RS02380 | Not Available | Positive | 459420 - 460526 | 39842.9 |
| demethylmenaquinone methyltransferase | AMETH_RS02385 | Not Available | Positive | 460528 - 461238 | 26149.3 |
| geranylgeranyl reductase family protein | AMETH_RS02390 | Not Available | Positive | 461281 - 462552 | 46014.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
