Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | AMETH_RS27030 | Not Available | Negative | 5553574 - 5553975 | 14336.0 |
| 3-oxoadipate enol-lactonase | AMETH_RS27035 | Not Available | Negative | 5553972 - 5554733 | 26744.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | AMETH_RS27040 | Not Available | Negative | 5554730 - 5556055 | 45890.6 |
| protocatechuate 3,4-dioxygenase subunit alpha | AMETH_RS27045 | Not Available | Negative | 5556048 - 5556593 | 19522.8 |
| protocatechuate 3,4-dioxygenase subunit beta | AMETH_RS27050 | Not Available | Negative | 5556590 - 5557333 | 28356.3 |
| thiolase family protein | AMETH_RS27055 | Not Available | Negative | 5557353 - 5558528 | 40813.5 |
| coa-transferase subunit beta | AMETH_RS27060 | Not Available | Negative | 5558525 - 5559253 | 25563.6 |
| coa transferase subunit a | AMETH_RS27065 | Not Available | Negative | 5559286 - 5560104 | 29762.3 |
| hypothetical protein | AMETH_RS38835 | Not Available | Positive | 5560191 - 5560358 | 5787.2 |
| d-glycerate dehydrogenase | AMETH_RS27070 | Not Available | Positive | 5560393 - 5561367 | 34570.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
