Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | AMETH_RS26325 | Not Available | Negative | 5414865 - 5417849 | 107762.0 |
| plp-dependent aminotransferase family protein | AMETH_RS26330 | Not Available | Negative | 5417893 - 5419281 | 48649.1 |
| dmt family transporter | AMETH_RS26335 | Not Available | Positive | 5419319 - 5420200 | 30211.7 |
| non-homologous end-joining dna ligase | AMETH_RS26340 | Not Available | Negative | 5420187 - 5421143 | 35499.3 |
| helix-turn-helix transcriptional regulator | AMETH_RS26345 | Not Available | Negative | 5421320 - 5424187 | 101669.0 |
| nad(+)/nadh kinase | AMETH_RS26350 | Not Available | Negative | 5424212 - 5425204 | 35061.8 |
| hypothetical protein | AMETH_RS26355 | Not Available | Negative | 5425269 - 5425646 | 13599.5 |
| short-chain dehydrogenase | AMETH_RS42210 | Not Available | Positive | 5425821 - 5425978 | 5227.14 |
| alkaline phosphatase d family protein | AMETH_RS26360 | Not Available | Positive | 5426048 - 5427355 | 48496.0 |
| rna polymerase sigma factor | AMETH_RS26365 | Not Available | Negative | 5427366 - 5428556 | 44265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
