Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5667 domain-containing protein | AMETH_RS02205 | Not Available | Negative | 426630 - 427628 | 33946.5 |
| sigma-70 family rna polymerase sigma factor | AMETH_RS02210 | Not Available | Negative | 427668 - 428258 | 21623.6 |
| amp-binding protein | AMETH_RS02215 | Not Available | Positive | 428471 - 429964 | 51569.5 |
| glutaredoxin family protein | AMETH_RS02220 | Not Available | Positive | 429972 - 430208 | 8861.31 |
| molybdopterin-dependent oxidoreductase | AMETH_RS02225 | Not Available | Positive | 430256 - 431770 | 52576.1 |
| redox-sensing transcriptional repressor rex | AMETH_RS02230 | Not Available | Positive | 431936 - 432718 | 27179.8 |
| glutamyl-trna reductase | AMETH_RS02235 | Not Available | Positive | 432719 - 434044 | 46917.0 |
| hydroxymethylbilane synthase | AMETH_RS02240 | Not Available | Positive | 434041 - 434997 | 32897.4 |
| bifunctional uroporphyrinogen-iii c-methyltransferase/uroporphyrinogen-iii synthase | AMETH_RS02245 | Not Available | Positive | 435053 - 436588 | 53146.2 |
| porphobilinogen synthase | AMETH_RS02250 | Not Available | Positive | 436668 - 437639 | 34544.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
