Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase family protein | AMETH_RS02165 | Not Available | Positive | 419048 - 419974 | 34361.1 |
| thioesterase family protein | AMETH_RS02170 | Not Available | Positive | 419971 - 420795 | 29376.4 |
| pyrroline-5-carboxylate reductase | AMETH_RS02175 | Not Available | Positive | 420819 - 421625 | 27899.1 |
| helix-turn-helix domain-containing protein | AMETH_RS02180 | Not Available | Positive | 421815 - 422027 | 7737.39 |
| 30s ribosomal protein bs22 | AMETH_RS36295 | Not Available | Positive | 422345 - 422446 | 4192.53 |
| nad-dependent epimerase/dehydratase family protein | AMETH_RS02185 | Not Available | Positive | 422638 - 423663 | 36452.3 |
| lysophospholipid acyltransferase family protein | AMETH_RS02190 | Not Available | Positive | 423692 - 424684 | 36059.4 |
| hypothetical protein | AMETH_RS41285 | Not Available | Positive | 424709 - 424840 | 4574.75 |
| had family phosphatase | AMETH_RS02195 | Not Available | Negative | 424921 - 425757 | 29459.3 |
| multidrug efflux smr transporter | AMETH_RS02200 | Not Available | Positive | 426319 - 426633 | 10496.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
