Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | AMETH_RS25160 | Not Available | Positive | 5176292 - 5178160 | 64635.5 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AMETH_RS25165 | Not Available | Positive | 5178169 - 5178792 | 20904.3 |
| lipase maturation factor family protein | AMETH_RS25170 | Not Available | Positive | 5179004 - 5180440 | 54408.7 |
| plp-dependent aminotransferase family protein | AMETH_RS25175 | Not Available | Positive | 5180451 - 5181968 | 53726.3 |
| pyridoxal phosphate-dependent aminotransferase | AMETH_RS25180 | Not Available | Positive | 5181910 - 5182959 | 37422.9 |
| short-chain dehydrogenase | AMETH_RS42205 | Not Available | Negative | 5183106 - 5183954 | 29093.9 |
| hypothetical protein | AMETH_RS36040 | Not Available | Positive | 5184021 - 5185451 | 49570.2 |
| helix-turn-helix transcriptional regulator | AMETH_RS40795 | Not Available | Positive | 5185430 - 5185585 | 5456.77 |
| regulatory protein recx | AMETH_RS25195 | Not Available | Negative | 5185935 - 5186471 | 20152.9 |
| recombinase reca | AMETH_RS25200 | Not Available | Negative | 5186475 - 5187515 | 36739.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
