Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa-transferase family protein | AMETH_RS24480 | Not Available | Negative | 5032631 - 5033773 | 40013.9 |
| acyl-coa dehydrogenase family protein | AMETH_RS24485 | Not Available | Negative | 5033773 - 5034918 | 41738.7 |
| tetr/acrr family transcriptional regulator | AMETH_RS24490 | Not Available | Positive | 5035010 - 5035612 | 21834.1 |
| short-chain dehydrogenase | AMETH_RS24495 | Not Available | Positive | 5035646 - 5037915 | 80392.2 |
| succinic semialdehyde dehydrogenase | AMETH_RS24500 | Not Available | Positive | 5038071 - 5039681 | 55908.9 |
| helix-turn-helix transcriptional regulator | AMETH_RS24505 | Not Available | Negative | 5040094 - 5043111 | 108708.0 |
| hypothetical protein | AMETH_RS38815 | Not Available | Negative | 5043176 - 5043346 | 6750.16 |
| duf397 domain-containing protein | AMETH_RS24510 | Not Available | Negative | 5043514 - 5043714 | 6911.12 |
| short-chain dehydrogenase | AMETH_RS24515 | Not Available | Negative | 5043771 - 5044621 | 31082.2 |
| hypothetical protein | AMETH_RS24520 | Not Available | Positive | 5044816 - 5045181 | 13468.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
