Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf485 domain-containing protein | AMETH_RS24435 | Not Available | Positive | 5025322 - 5025741 | 15680.0 |
| cation acetate symporter | AMETH_RS24440 | Not Available | Positive | 5025747 - 5027345 | 55492.7 |
| type iii plp-dependent enzyme | AMETH_RS24445 | Not Available | Positive | 5027358 - 5028506 | 40165.6 |
| adenosylmethionine decarboxylase | AMETH_RS24450 | Not Available | Positive | 5028496 - 5028876 | 13344.9 |
| spermidine synthase | AMETH_RS24455 | Not Available | Positive | 5028857 - 5029720 | 31413.1 |
| duf3817 domain-containing protein | AMETH_RS24460 | Not Available | Negative | 5029686 - 5030042 | 12832.0 |
| hypothetical protein | AMETH_RS24465 | Not Available | Negative | 5030057 - 5030449 | 14915.6 |
| murein transglycosylase | AMETH_RS24470 | Not Available | Negative | 5030473 - 5031369 | 30763.0 |
| hypothetical protein | AMETH_RS24475 | Not Available | Negative | 5031497 - 5031979 | 17681.9 |
| hypothetical protein | AMETH_RS38810 | Not Available | Negative | 5032282 - 5032449 | 5964.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
