Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | AMETH_RS23905 | Not Available | Positive | 4908311 - 4908906 | 21824.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AMETH_RS23910 | Not Available | Negative | 4909078 - 4910994 | 67926.0 |
| lysr family transcriptional regulator | AMETH_RS23915 | Not Available | Negative | 4911385 - 4912305 | 32887.9 |
| succinate dehydrogenase cytochrome b subunit | AMETH_RS23920 | Not Available | Positive | 4912377 - 4913069 | 24766.6 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | AMETH_RS23925 | Not Available | Positive | 4913066 - 4914994 | 70017.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | AMETH_RS23930 | Not Available | Positive | 4914991 - 4915737 | 25758.8 |
| duf2786 domain-containing protein | AMETH_RS41680 | Not Available | Negative | 4916543 - 4917619 | 39273.3 |
| class i sam-dependent rna methyltransferase | AMETH_RS23940 | Not Available | Negative | 4917661 - 4918857 | 42841.0 |
| apc family permease | AMETH_RS23945 | Not Available | Negative | 4918854 - 4920884 | 73138.8 |
| trka family potassium uptake protein | AMETH_RS23950 | Not Available | Positive | 4920989 - 4921654 | 23592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
