Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | AMETH_RS23605 | Not Available | Positive | 4850665 - 4851622 | 33233.6 |
| glycosyltransferase family 87 protein | AMETH_RS23610 | Not Available | Positive | 4851952 - 4853187 | 44677.3 |
| glutamine synthetase | AMETH_RS23615 | Not Available | Negative | 4853147 - 4854475 | 46851.9 |
| iuca/iucc family siderophore biosynthesis protein | AMETH_RS23620 | Not Available | Negative | 4854469 - 4856229 | 65735.8 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | AMETH_RS23625 | Not Available | Negative | 4856226 - 4857506 | 47374.4 |
| pyridoxal-dependent decarboxylase | AMETH_RS23630 | Not Available | Negative | 4857503 - 4858921 | 48311.9 |
| llm class f420-dependent oxidoreductase | AMETH_RS23635 | Not Available | Negative | 4859069 - 4860019 | 34150.1 |
| s9 family peptidase | AMETH_RS23640 | Not Available | Negative | 4860016 - 4862100 | 75774.0 |
| voc family protein | AMETH_RS23645 | Not Available | Positive | 4862203 - 4862550 | 12244.3 |
| helix-turn-helix transcriptional regulator | AMETH_RS23650 | Not Available | Positive | 4862559 - 4862909 | 12932.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
