Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf998 domain-containing protein | AMETH_RS01920 | Not Available | Negative | 375017 - 375643 | 21525.5 |
| protein phosphatase 2c domain-containing protein | AMETH_RS01925 | Not Available | Negative | 375703 - 376449 | 26772.5 |
| helix-turn-helix domain-containing protein | AMETH_RS01930 | Not Available | Positive | 376512 - 376721 | 7599.11 |
| clp protease n-terminal domain-containing protein | AMETH_RS01935 | Not Available | Positive | 376721 - 377248 | 18849.7 |
| yitt family protein | AMETH_RS01940 | Not Available | Negative | 377240 - 377863 | 21629.1 |
| plp-dependent aminotransferase family protein | AMETH_RS01945 | Not Available | Positive | 377926 - 379347 | 50508.6 |
| hypothetical protein | AMETH_RS01950 | Not Available | Negative | 379759 - 380553 | 26502.9 |
| rna polymerase sigma factor | AMETH_RS01955 | Not Available | Positive | 380842 - 381384 | 20249.4 |
| pyridoxal phosphate-dependent aminotransferase | AMETH_RS01960 | Not Available | Negative | 382096 - 383262 | 41675.6 |
| duf445 domain-containing protein | AMETH_RS01965 | Not Available | Positive | 383292 - 384578 | 47441.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
