Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msmeg_3727 family pqq-associated protein | AMETH_RS22675 | Not Available | Negative | 4658484 - 4658939 | 16051.0 |
| catalase/peroxidase hpi | AMETH_RS22680 | Not Available | Negative | 4659103 - 4661331 | 82810.2 |
| manganese efflux pump | AMETH_RS22685 | Not Available | Negative | 4661363 - 4661911 | 19347.0 |
| hypothetical protein | AMETH_RS41660 | Not Available | Negative | 4662093 - 4662218 | 4817.58 |
| ribose-5-phosphate isomerase | AMETH_RS22690 | Not Available | Positive | 4662507 - 4662986 | 17052.9 |
| fructose-bisphosphatase class ii | AMETH_RS22695 | Not Available | Negative | 4663389 - 4664366 | 32752.1 |
| class i fructose-bisphosphate aldolase | AMETH_RS22700 | Not Available | Negative | 4664387 - 4665364 | 34959.8 |
| lysr family transcriptional regulator | AMETH_RS22705 | Not Available | Negative | 4665387 - 4666421 | 37188.7 |
| aminopeptidase n | AMETH_RS22710 | Not Available | Negative | 4666837 - 4669368 | 92254.1 |
| pyrroloquinoline quinone biosynthesis protein pqqe | AMETH_RS22715 | Not Available | Negative | 4669373 - 4670482 | 40678.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
