Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanase | AMETH_RS22075 | Not Available | Negative | 4538754 - 4540139 | 49956.4 |
| tryptophan dimethylallyltransferase family protein | AMETH_RS22080 | Not Available | Negative | 4540160 - 4541200 | 36776.5 |
| amp-binding protein | AMETH_RS41635 | Not Available | Negative | 4541636 - 4542742 | 39243.0 |
| short-chain dehydrogenase | AMETH_RS41640 | Not Available | Negative | 4542807 - 4543067 | 9095.83 |
| short-chain dehydrogenase | AMETH_RS41645 | Not Available | Negative | 4543129 - 4543191 | 2170.55 |
| p-hydroxycinnamoyl coa hydratase/lyase | AMETH_RS22090 | Not Available | Negative | 4543235 - 4544098 | 31913.8 |
| ychj family protein | AMETH_RS22095 | Not Available | Positive | 4544189 - 4544575 | 14391.8 |
| srpbcc family protein | AMETH_RS22100 | Not Available | Positive | 4544572 - 4544985 | 14824.0 |
| hypothetical protein | AMETH_RS22105 | Not Available | Positive | 4545035 - 4545454 | 14366.9 |
| universal stress protein | AMETH_RS22110 | Not Available | Negative | 4545473 - 4546351 | 30700.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
