Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase family protein | AMETH_RS22035 | Not Available | Positive | 4528937 - 4529695 | 26322.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS22040 | Not Available | Negative | 4529769 - 4530236 | 17438.0 |
| short-chain dehydrogenase | AMETH_RS22045 | Not Available | Positive | 4530317 - 4531801 | 51122.4 |
| llm class flavin-dependent oxidoreductase | AMETH_RS39305 | Not Available | Positive | 4531798 - 4533330 | 55134.9 |
| hypothetical protein | AMETH_RS40640 | Not Available | Positive | 4533327 - 4533515 | 6652.83 |
| hypothetical protein | AMETH_RS38140 | Not Available | Negative | 4533847 - 4534011 | 5839.91 |
| nitrate- and nitrite sensing domain-containing protein | AMETH_RS22055 | Not Available | Positive | 4534872 - 4537205 | 84860.2 |
| roadblock/lc7 domain-containing protein | AMETH_RS22060 | Not Available | Positive | 4537227 - 4537652 | 15244.2 |
| duf742 domain-containing protein | AMETH_RS22065 | Not Available | Positive | 4537652 - 4538017 | 13202.2 |
| atp/gtp-binding protein | AMETH_RS22070 | Not Available | Positive | 4537998 - 4538597 | 21684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
