Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | AMETH_RS21755 | Not Available | Negative | 4478389 - 4478730 | 12432.9 |
| merr family transcriptional regulator | AMETH_RS21760 | Not Available | Negative | 4478727 - 4479125 | 14877.4 |
| short-chain dehydrogenase | AMETH_RS21765 | Not Available | Negative | 4479155 - 4479725 | 21354.8 |
| dna polymerase iv | AMETH_RS21770 | Not Available | Positive | 4479784 - 4480977 | 42762.9 |
| hypothetical protein | AMETH_RS38130 | Not Available | Negative | 4481367 - 4481552 | 5902.65 |
| short-chain dehydrogenase | AMETH_RS40605 | Not Available | Positive | 4481982 - 4482359 | 12757.0 |
| hypothetical protein | AMETH_RS40610 | Not Available | Positive | 4482610 - 4483257 | 22984.9 |
| polysaccharide deacetylase family protein | AMETH_RS21785 | Not Available | Positive | 4483349 - 4484131 | 28006.6 |
| abc transporter substrate-binding protein | AMETH_RS21790 | Not Available | Positive | 4484216 - 4485160 | 31970.7 |
| short-chain dehydrogenase | AMETH_RS37140 | Not Available | Positive | 4485147 - 4485986 | 30331.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
