Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | AMETH_RS21715 | Not Available | Positive | 4469025 - 4470194 | 41875.6 |
| short-chain dehydrogenase | AMETH_RS40590 | Not Available | Positive | 4471185 - 4471604 | 15032.5 |
| short-chain dehydrogenase | AMETH_RS40595 | Not Available | Positive | 4471789 - 4472599 | 28247.1 |
| atp-binding protein | AMETH_RS38120 | Not Available | Positive | 4472596 - 4472826 | 8215.93 |
| atp-binding protein | AMETH_RS21730 | Not Available | Positive | 4472944 - 4473348 | 14472.2 |
| atp-binding protein | AMETH_RS21735 | Not Available | Negative | 4473590 - 4475014 | 52397.2 |
| fad-dependent oxidoreductase | AMETH_RS21740 | Not Available | Negative | 4475011 - 4476669 | 59497.4 |
| taud/tfda family dioxygenase | AMETH_RS21745 | Not Available | Positive | 4476814 - 4477749 | 35596.2 |
| limonene-1,2-epoxide hydrolase family protein | AMETH_RS21750 | Not Available | Positive | 4477766 - 4478200 | 15936.0 |
| short-chain dehydrogenase | AMETH_RS40600 | Not Available | Negative | 4478246 - 4478452 | 7371.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
