Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic polysaccharide monooxygenase auxiliary activity family 9 protein | AMETH_RS21280 | Not Available | Negative | 4390354 - 4390869 | 18038.2 |
| hypothetical protein | AMETH_RS21285 | Not Available | Negative | 4391081 - 4392175 | 38374.8 |
| hypothetical protein | AMETH_RS21290 | Not Available | Negative | 4392254 - 4392466 | 7666.12 |
| s1c family serine protease | AMETH_RS21295 | Not Available | Positive | 4392705 - 4393730 | 34001.7 |
| amino acid permease | AMETH_RS39290 | Not Available | Positive | 4393750 - 4394400 | 22368.7 |
| maoc family dehydratase | AMETH_RS21305 | Not Available | Negative | 4394391 - 4394849 | 16429.7 |
| mfs transporter | AMETH_RS21310 | Not Available | Negative | 4394865 - 4396175 | 46706.1 |
| zinc-binding dehydrogenase | AMETH_RS21315 | Not Available | Negative | 4396281 - 4396940 | 23129.8 |
| lysr family transcriptional regulator | AMETH_RS21320 | Not Available | Negative | 4396949 - 4397851 | 32175.7 |
| coa transferase subunit a | AMETH_RS21325 | Not Available | Positive | 4397959 - 4398888 | 33841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
