Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1986 domain-containing protein | AMETH_RS20890 | Not Available | Positive | 4308892 - 4309587 | 23201.4 |
| trypsin-like serine protease | AMETH_RS20895 | Not Available | Positive | 4309590 - 4310411 | 28277.3 |
| d-2-hydroxyacid dehydrogenase family protein | AMETH_RS20900 | Not Available | Negative | 4310450 - 4311391 | 34366.4 |
| shikimate dehydrogenase | AMETH_RS20905 | Not Available | Negative | 4311402 - 4312217 | 27427.8 |
| endolytic transglycosylase mltg | AMETH_RS20910 | Not Available | Negative | 4312231 - 4313811 | 56685.6 |
| holliday junction resolvase ruvx | AMETH_RS20915 | Not Available | Negative | 4313808 - 4314299 | 17067.4 |
| alanine--trna ligase | AMETH_RS20920 | Not Available | Negative | 4314296 - 4316956 | 95898.4 |
| hypothetical protein | AMETH_RS20925 | Not Available | Negative | 4317039 - 4317338 | 10428.4 |
| duf948 domain-containing protein | AMETH_RS20930 | Not Available | Negative | 4317335 - 4317733 | 13821.0 |
| nad(p)-dependent oxidoreductase | AMETH_RS20935 | Not Available | Negative | 4317791 - 4318663 | 29706.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
