Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | AMETH_RS01670 | Not Available | Positive | 337263 - 337820 | 19909.2 |
| sgnh/gdsl hydrolase family protein | AMETH_RS01675 | Not Available | Positive | 337830 - 338555 | 25114.4 |
| c1 family peptidase | AMETH_RS01680 | Not Available | Positive | 338737 - 339822 | 38733.4 |
| hypothetical protein | AMETH_RS01685 | Not Available | Positive | 339836 - 340357 | 18075.8 |
| protease inhibitor i42 family protein | AMETH_RS01690 | Not Available | Positive | 340429 - 340776 | 12747.1 |
| rna polymerase sigma factor | AMETH_RS01695 | Not Available | Positive | 340880 - 341485 | 22380.9 |
| hypothetical protein | AMETH_RS01700 | Not Available | Positive | 341482 - 341964 | 16835.9 |
| chat domain-containing protein | AMETH_RS01705 | Not Available | Positive | 342008 - 344590 | 92722.2 |
| srpbcc family protein | AMETH_RS01710 | Not Available | Negative | 344587 - 345027 | 16220.3 |
| antitoxin | AMETH_RS01715 | Not Available | Positive | 345119 - 345400 | 9454.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
