Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro peptidase family protein | AMETH_RS20790 | Not Available | Negative | 4292135 - 4293232 | 39100.2 |
| b-4dmt family transporter | AMETH_RS20795 | Not Available | Positive | 4293266 - 4293724 | 15876.5 |
| beta-xylosidase | AMETH_RS20800 | Not Available | Negative | 4293726 - 4295219 | 51486.6 |
| gnat family n-acetyltransferase | AMETH_RS20805 | Not Available | Negative | 4295263 - 4296195 | 33697.8 |
| type ii 3-dehydroquinate dehydratase | AMETH_RS20810 | Not Available | Negative | 4296192 - 4296623 | 15248.2 |
| 3-dehydroquinate synthase | AMETH_RS20815 | Not Available | Negative | 4296620 - 4297729 | 39026.2 |
| shikimate kinase | AMETH_RS20820 | Not Available | Negative | 4297726 - 4298229 | 17505.9 |
| chorismate synthase | AMETH_RS20825 | Not Available | Negative | 4298226 - 4299437 | 42372.5 |
| a24 family peptidase | AMETH_RS20830 | Not Available | Negative | 4299991 - 4300551 | 18224.7 |
| anti-sigma factor | AMETH_RS20835 | Not Available | Negative | 4301269 - 4301898 | 21870.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
