Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa desaturase | AMETH_RS20390 | Not Available | Positive | 4207096 - 4208010 | 34512.0 |
| hypothetical protein | AMETH_RS20395 | Not Available | Negative | 4208014 - 4208319 | 10588.6 |
| quinone oxidoreductase | AMETH_RS20400 | Not Available | Positive | 4208398 - 4209369 | 33417.7 |
| adenosyl-hopene transferase hpnh | AMETH_RS20405 | Not Available | Negative | 4209452 - 4210456 | 37809.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AMETH_RS20410 | Not Available | Negative | 4210460 - 4211932 | 51615.3 |
| squalene--hopene cyclase | AMETH_RS20415 | Not Available | Negative | 4211929 - 4213830 | 69718.3 |
| polyprenyl synthetase family protein | AMETH_RS20420 | Not Available | Negative | 4213831 - 4214841 | 34916.6 |
| hydroxysqualene dehydroxylase hpne | AMETH_RS20425 | Not Available | Negative | 4214838 - 4216193 | 47920.7 |
| presqualene diphosphate synthase hpnd | AMETH_RS20430 | Not Available | Negative | 4216190 - 4217050 | 31638.9 |
| squalene synthase hpnc | AMETH_RS37080 | Not Available | Negative | 4217047 - 4217943 | 32943.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
