Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit alpha | AMETH_RS39285 | Not Available | Positive | 4174133 - 4176916 | 102812.0 |
| ribonucleotide-diphosphate reductase subunit beta | AMETH_RS20255 | Not Available | Positive | 4176913 - 4177983 | 40809.4 |
| cytochrome p450 | AMETH_RS20260 | Not Available | Positive | 4178069 - 4179514 | 54012.2 |
| short-chain dehydrogenase | AMETH_RS38110 | Not Available | Positive | 4179600 - 4179703 | 3698.22 |
| peroxiredoxin | AMETH_RS20265 | Not Available | Negative | 4179717 - 4180172 | 16744.1 |
| short-chain dehydrogenase | AMETH_RS20270 | Not Available | Negative | 4180169 - 4181995 | 65667.2 |
| gnat family n-acetyltransferase | AMETH_RS20275 | Not Available | Negative | 4182291 - 4182881 | 21265.4 |
| hypothetical protein | AMETH_RS40545 | Not Available | Negative | 4182938 - 4183102 | 5789.89 |
| short-chain dehydrogenase | AMETH_RS40550 | Not Available | Negative | 4183257 - 4183457 | 7389.93 |
| lcp family protein | AMETH_RS20285 | Not Available | Negative | 4183579 - 4184670 | 38783.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
