Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | AMETH_RS19480 | Not Available | Negative | 4004085 - 4005158 | 40644.3 |
| hypothetical protein | AMETH_RS37035 | Not Available | Positive | 4005186 - 4005479 | 10744.7 |
| abc transporter atp-binding protein | AMETH_RS19485 | Not Available | Positive | 4005767 - 4006687 | 31534.9 |
| abc transporter permease | AMETH_RS19490 | Not Available | Positive | 4006684 - 4008036 | 46708.3 |
| bifunctional ynce family protein/alkaline phosphatase family protein | AMETH_RS19495 | Not Available | Positive | 4008040 - 4010790 | 97613.0 |
| alkaline phosphatase phox | AMETH_RS38085 | Not Available | Positive | 4010997 - 4011341 | 12505.5 |
| short-chain dehydrogenase | AMETH_RS40445 | Not Available | Negative | 4011463 - 4011605 | 5282.4 |
| helix-turn-helix domain-containing protein | AMETH_RS39260 | Not Available | Negative | 4011655 - 4011930 | 10011.0 |
| hypothetical protein | AMETH_RS39265 | Not Available | Negative | 4011933 - 4012094 | 5345.21 |
| hypothetical protein | AMETH_RS40450 | Not Available | Positive | 4012237 - 4012665 | 15712.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
