Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | AMETH_RS38750 | Not Available | Positive | 3919591 - 3920601 | 35884.9 |
| caspase, eacc1-associated type | AMETH_RS19065 | Not Available | Negative | 3920540 - 3924913 | 154328.0 |
| effector-associated constant component eacc1 | AMETH_RS19070 | Not Available | Negative | 3924910 - 3925278 | 12854.2 |
| hypothetical protein | AMETH_RS40390 | Not Available | Negative | 3925401 - 3925754 | 12524.7 |
| phb depolymerase family esterase | AMETH_RS40395 | Not Available | Positive | 3925768 - 3926337 | 19695.9 |
| hypothetical protein | AMETH_RS40400 | Not Available | Positive | 3926350 - 3926667 | 11031.8 |
| iclr family transcriptional regulator | AMETH_RS19085 | Not Available | Positive | 3926691 - 3927485 | 28636.5 |
| nad(p)-dependent oxidoreductase | AMETH_RS41610 | Not Available | Negative | 3927613 - 3928005 | 13936.7 |
| nad(p)-dependent oxidoreductase | AMETH_RS41615 | Not Available | Negative | 3927948 - 3928547 | 21028.3 |
| hydroxymethylglutaryl-coa lyase | AMETH_RS19095 | Not Available | Negative | 3928544 - 3929470 | 32176.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
