Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | AMETH_RS42125 | Not Available | Positive | 3785297 - 3786250 | 34939.7 |
| helix-turn-helix domain-containing protein | AMETH_RS18365 | Not Available | Positive | 3786247 - 3786615 | 13335.0 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | AMETH_RS18370 | Not Available | Negative | 3786627 - 3788996 | 87664.7 |
| amp-binding protein | AMETH_RS18375 | Not Available | Negative | 3789007 - 3790641 | 58257.6 |
| paax family transcriptional regulator c-terminal domain-containing protein | AMETH_RS18380 | Not Available | Positive | 3790716 - 3791549 | 31171.2 |
| rida family protein | AMETH_RS18385 | Not Available | Negative | 3791555 - 3791947 | 13645.3 |
| sdr family nad(p)-dependent oxidoreductase | AMETH_RS18390 | Not Available | Negative | 3791944 - 3792690 | 26233.4 |
| enoyl-coa hydratase family protein | AMETH_RS18395 | Not Available | Negative | 3792687 - 3793517 | 30130.4 |
| acyl-coa dehydrogenase family protein | AMETH_RS18400 | Not Available | Negative | 3793514 - 3794662 | 40583.2 |
| rna polymerase subunit sigma-70 | AMETH_RS18405 | Not Available | Positive | 3794782 - 3795783 | 37262.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
