Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMETH_RS17390 | Not Available | Positive | 3595168 - 3595545 | 14263.3 |
| hypothetical protein | AMETH_RS17395 | Not Available | Positive | 3595542 - 3595772 | 8569.24 |
| trimeric intracellular cation channel family protein | AMETH_RS17400 | Not Available | Positive | 3595804 - 3596517 | 24710.2 |
| hypothetical protein | AMETH_RS40245 | Not Available | Negative | 3596514 - 3596711 | 7102.58 |
| short-chain dehydrogenase | AMETH_RS40250 | Not Available | Negative | 3596951 - 3597154 | 7196.47 |
| hypothetical protein | AMETH_RS40255 | Not Available | Negative | 3597154 - 3597366 | 7295.74 |
| class i sam-dependent methyltransferase | AMETH_RS17410 | Not Available | Negative | 3597378 - 3598085 | 25659.3 |
| lysr family transcriptional regulator | AMETH_RS17415 | Not Available | Negative | 3598128 - 3599003 | 30841.3 |
| nuclear transport factor 2 family protein | AMETH_RS17420 | Not Available | Positive | 3599092 - 3599448 | 13260.6 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS17425 | Not Available | Negative | 3599414 - 3599740 | 11650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
