Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | AMETH_RS15775 | Not Available | Negative | 3270488 - 3270955 | 16976.1 |
| hypothetical protein | AMETH_RS15780 | Not Available | Negative | 3271248 - 3272198 | 34138.5 |
| duf6932 family protein | AMETH_RS15785 | Not Available | Negative | 3272182 - 3272760 | 21951.9 |
| site-specific integrase | AMETH_RS15790 | Not Available | Negative | 3273073 - 3273822 | 27931.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | AMETH_RS15795 | Not Available | Negative | 3274084 - 3274554 | 16970.9 |
| Trna-leu | Not Available | Not Available | Positive | 3274663 - 3274746 | Not Available |
| ykva family protein | AMETH_RS15805 | Not Available | Positive | 3274903 - 3275328 | 15443.2 |
| dmt family transporter | AMETH_RS15810 | Not Available | Positive | 3275351 - 3276235 | 30255.9 |
| hypothetical protein | AMETH_RS15815 | Not Available | Positive | 3276264 - 3276707 | 16886.7 |
| msmeg_6728 family protein | AMETH_RS15820 | Not Available | Positive | 3276708 - 3277190 | 18311.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
