Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | AMETH_RS12860 | Not Available | Positive | 2678740 - 2679303 | 19166.7 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | AMETH_RS12865 | Not Available | Positive | 2679300 - 2680661 | 46658.5 |
| sdr family oxidoreductase | AMETH_RS12870 | Not Available | Positive | 2680693 - 2681382 | 23603.1 |
| glycosyltransferase family 9 protein | AMETH_RS12875 | Not Available | Positive | 2681379 - 2682323 | 32919.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | AMETH_RS12880 | Not Available | Positive | 2682325 - 2683581 | 42981.4 |
| stas domain-containing protein | AMETH_RS12885 | Not Available | Negative | 2683585 - 2683959 | 13162.8 |
| atp-binding protein | AMETH_RS12890 | Not Available | Negative | 2684274 - 2684639 | 13563.3 |
| short-chain dehydrogenase | AMETH_RS12895 | Not Available | Positive | 2684729 - 2684959 | 8420.1 |
| bon domain-containing protein | AMETH_RS12900 | Not Available | Positive | 2684959 - 2685219 | 9779.44 |
| short-chain dehydrogenase | AMETH_RS12905 | Not Available | Positive | 2685235 - 2685680 | 14829.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
