Amycolatopsis methanolica 239

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis methanolica 239 is characterized by the presence of flagella, which suggests a capacity for motility. This trait may allow the organism to navigate its environment effectively, potentially aiding in colonization and survival in various ecological niches. The strain exhibits a single replicon, indicating a streamlined genetic organization. This can be an advantage in terms of replication efficiency and resource allocation, which may contribute to its adaptability in diverse conditions. The genomic information of Amycolatopsis methanolica 239 is cataloged under the accession number NZ_CP009110.1. This data provides a basis for understanding the genetic makeup and potential metabolic pathways of the organism, although specific metabolic capabilities or ecological roles are not provided. In summary, the presence of flagella and a singular replicon in Amycolatopsis methanolica 239 are notable traits that underscore its potential adaptability and mobility. These characteristics may play significant roles in its ecological interactions and survival strategies, although further research would be necessary to elucidate the full range of its biological implications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis methanolica
Strain239

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis methanolica 239 chromosome, complete genome.

Gene Summary

Adenine Count

1028183 bp

Thymine Count

1032505 bp

Guanine Count

2597107 bp

Cytosine Count

2579596 bp

Genome Length

7237391 bp

Protein-coding Genes

7360 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAMETH_RS38690Not AvailablePositive2657339 - 26575126374.22
duf2945 domain-containing proteinAMETH_RS12765Not AvailablePositive2657595 - 26578047565.71
glycoside hydrolase family 65 proteinAMETH_RS12770Not AvailableNegative2658093 - 266047488526.2
had family phosphataseAMETH_RS12775Not AvailableNegative2660471 - 266120525835.3
metalloregulator arsr/smtb family transcription factorAMETH_RS12780Not AvailableNegative2661278 - 266162812780.4
amidaseAMETH_RS12785Not AvailablePositive2661678 - 266309350321.7
sco6745 family proteinAMETH_RS12790Not AvailablePositive2663090 - 266391429237.9
duf6480 family proteinAMETH_RS12795Not AvailableNegative2664141 - 26644289420.19
atp-dependent clp protease atp-binding subunitAMETH_RS12800Not AvailableNegative2664425 - 266695393159.2
sigb/sigf/sigg family rna polymerase sigma factorAMETH_RS12805Not AvailableNegative2667072 - 266786629392.6

Displaying genes 2771 – 2780 of 7467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm00200023-Dehydroshikimic acidC7H8O5Chemical structure of 3-Dehydroshikimic acid27655-56-7
Average172.1354Da
Monoisotopic172.037173366Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.