Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | AMETH_RS12715 | Not Available | Positive | 2646937 - 2648259 | 46835.0 |
| signal peptidase ii | AMETH_RS12720 | Not Available | Positive | 2648438 - 2649013 | 20240.1 |
| rlua family pseudouridine synthase | AMETH_RS12725 | Not Available | Positive | 2649010 - 2649936 | 32953.4 |
| rida family protein | AMETH_RS12730 | Not Available | Negative | 2649933 - 2650328 | 13746.6 |
| yafy family protein | AMETH_RS12735 | Not Available | Positive | 2650426 - 2651400 | 35230.2 |
| hypothetical protein | AMETH_RS12740 | Not Available | Negative | 2651397 - 2652395 | 34144.3 |
| duf885 family protein | AMETH_RS12745 | Not Available | Positive | 2652505 - 2654160 | 61075.3 |
| duf885 family protein | AMETH_RS12750 | Not Available | Positive | 2654157 - 2655788 | 59758.2 |
| llm class f420-dependent oxidoreductase | AMETH_RS12755 | Not Available | Positive | 2655834 - 2656874 | 37516.3 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMETH_RS12760 | Not Available | Negative | 2656867 - 2657247 | 13794.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
