Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | AMETH_RS12570 | Not Available | Positive | 2613264 - 2614223 | 34885.0 |
| hypothetical protein | AMETH_RS12575 | Not Available | Positive | 2614220 - 2614963 | 26345.3 |
| penicillin-binding protein 2 | AMETH_RS12580 | Not Available | Positive | 2614999 - 2616852 | 65410.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | AMETH_RS12585 | Not Available | Positive | 2617031 - 2618620 | 55230.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | AMETH_RS12590 | Not Available | Positive | 2618617 - 2620086 | 50661.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | AMETH_RS12595 | Not Available | Positive | 2620083 - 2621171 | 38559.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | AMETH_RS12600 | Not Available | Positive | 2621174 - 2622568 | 47618.3 |
| putative lipid ii flippase ftsw | AMETH_RS12605 | Not Available | Positive | 2622555 - 2623979 | 50403.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | AMETH_RS12610 | Not Available | Positive | 2623986 - 2625089 | 37781.1 |
| udp-n-acetylmuramate--l-alanine ligase | AMETH_RS12615 | Not Available | Positive | 2625086 - 2626495 | 48713.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
