Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMETH_RS11490 | Not Available | Positive | 2398761 - 2399261 | 19173.7 |
| srpbcc family protein | AMETH_RS11495 | Not Available | Positive | 2399314 - 2399820 | 18839.3 |
| llm class flavin-dependent oxidoreductase | AMETH_RS11500 | Not Available | Positive | 2399820 - 2400896 | 38049.5 |
| short-chain dehydrogenase | AMETH_RS11505 | Not Available | Positive | 2400923 - 2401567 | 21871.4 |
| abc-f family atp-binding cassette domain-containing protein | AMETH_RS11510 | Not Available | Positive | 2401804 - 2403441 | 58734.0 |
| hypothetical protein | AMETH_RS39980 | Not Available | Positive | 2403583 - 2404008 | 14567.3 |
| penicillin-binding transpeptidase domain-containing protein | AMETH_RS11515 | Not Available | Positive | 2404005 - 2404955 | 31897.8 |
| phosphatidylinositol-specific phospholipase c/glycerophosphodiester phosphodiesterase family protein | AMETH_RS11520 | Not Available | Positive | 2405062 - 2405904 | 30754.5 |
| npp1 family protein | AMETH_RS11525 | Not Available | Negative | 2406053 - 2406805 | 27076.2 |
| ynce family protein | AMETH_RS11530 | Not Available | Positive | 2406950 - 2408158 | 43523.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
