Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esx secretion-associated protein espg | AMETH_RS11400 | Not Available | Positive | 2380191 - 2381036 | 30512.8 |
| hypothetical protein | AMETH_RS11405 | Not Available | Positive | 2381056 - 2381457 | 14546.3 |
| hypothetical protein | AMETH_RS11410 | Not Available | Positive | 2381485 - 2383341 | 60975.9 |
| type vii secretion target | AMETH_RS11415 | Not Available | Positive | 2383347 - 2383694 | 12319.2 |
| ybab/ebfc family nucleoid-associated protein | AMETH_RS11420 | Not Available | Positive | 2383691 - 2384182 | 17812.3 |
| rhs repeat-associated core domain-containing protein | AMETH_RS11425 | Not Available | Positive | 2384176 - 2389164 | 176564.0 |
| hypothetical protein | AMETH_RS11430 | Not Available | Positive | 2389195 - 2389923 | 26964.8 |
| ndma-dependent alcohol dehydrogenase | AMETH_RS11435 | Not Available | Positive | 2390078 - 2391196 | 39081.8 |
| hypothetical protein | AMETH_RS11440 | Not Available | Negative | 2391197 - 2391595 | 12682.5 |
| abc transporter atp-binding protein | AMETH_RS11445 | Not Available | Positive | 2391528 - 2392361 | 29703.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
