Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tannase/feruloyl esterase family alpha/beta hydrolase | AMETH_RS11080 | Not Available | Negative | 2315309 - 2316901 | 55861.5 |
| isocitrate/isopropylmalate dehydrogenase family protein | AMETH_RS11085 | Not Available | Negative | 2316989 - 2318065 | 38382.7 |
| merr family dna-binding protein | AMETH_RS11090 | Not Available | Positive | 2318186 - 2318536 | 13238.9 |
| nad-dependent epimerase/dehydratase family protein | AMETH_RS39115 | Not Available | Positive | 2318533 - 2318880 | 12274.2 |
| hypothetical protein | AMETH_RS39120 | Not Available | Positive | 2318877 - 2319332 | 15837.3 |
| laci family dna-binding transcriptional regulator | AMETH_RS11100 | Not Available | Negative | 2319629 - 2320651 | 36816.1 |
| hypothetical protein | AMETH_RS11105 | Not Available | Negative | 2320668 - 2321003 | 12484.9 |
| duf6772 family protein | AMETH_RS11110 | Not Available | Negative | 2321000 - 2321905 | 34365.1 |
| mfs transporter | AMETH_RS11115 | Not Available | Positive | 2322055 - 2323323 | 44111.6 |
| helix-turn-helix domain-containing protein | AMETH_RS11120 | Not Available | Positive | 2323412 - 2324326 | 33139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
