Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toll/interleukin-1 receptor domain-containing protein | AMETH_RS35680 | Not Available | Negative | 2305946 - 2307109 | 42969.0 |
| sefir domain-containing protein | AMETH_RS11045 | Not Available | Positive | 2307251 - 2308687 | 51066.9 |
| dead/deah box helicase | AMETH_RS11050 | Not Available | Positive | 2308699 - 2311650 | 108227.0 |
| hypothetical protein | AMETH_RS11055 | Not Available | Positive | 2311647 - 2312852 | 44508.0 |
| duf5994 family protein | AMETH_RS11060 | Not Available | Positive | 2313072 - 2313443 | 13230.8 |
| duf6292 family protein | AMETH_RS11065 | Not Available | Negative | 2313440 - 2313856 | 14545.1 |
| hypothetical protein | AMETH_RS39900 | Not Available | Negative | 2313880 - 2314158 | 9776.52 |
| sdr family oxidoreductase | AMETH_RS39905 | Not Available | Negative | 2314155 - 2314610 | 16109.2 |
| nuclear transport factor 2 family protein | AMETH_RS11075 | Not Available | Negative | 2314607 - 2314876 | 9974.67 |
| hypothetical protein | AMETH_RS39910 | Not Available | Negative | 2314869 - 2315051 | 6934.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
