Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconolactone delta-isomerase | AMETH_RS10855 | Not Available | Negative | 2262170 - 2262448 | 10665.9 |
| catechol 1,2-dioxygenase | AMETH_RS10860 | Not Available | Negative | 2262470 - 2263315 | 30601.7 |
| mandelate racemase/muconate lactonizing enzyme family protein | AMETH_RS10865 | Not Available | Negative | 2263351 - 2264454 | 39717.7 |
| lysr substrate-binding domain-containing protein | AMETH_RS10870 | Not Available | Negative | 2264451 - 2265353 | 32147.8 |
| benzoate 1,2-dioxygenase large subunit | AMETH_RS10875 | Not Available | Positive | 2265573 - 2266922 | 50683.2 |
| benzoate 1,2-dioxygenase small subunit | AMETH_RS10880 | Not Available | Positive | 2266919 - 2267425 | 20070.4 |
| benzoate 1,2-dioxygenase electron transfer component benc | AMETH_RS10885 | Not Available | Positive | 2267436 - 2270078 | 93316.1 |
| mfs transporter | AMETH_RS10890 | Not Available | Positive | 2270147 - 2271457 | 44451.2 |
| luxr family transcriptional regulator | AMETH_RS10895 | Not Available | Positive | 2271467 - 2274055 | 91171.1 |
| benzoate/h(+) symporter bene family transporter | AMETH_RS10900 | Not Available | Negative | 2274050 - 2275285 | 42441.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
