Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnose abc transporter substrate-binding protein | AMETH_RS10665 | Not Available | Positive | 2224312 - 2225379 | 36939.5 |
| l-rhamnose mutarotase | AMETH_RS10670 | Not Available | Positive | 2225437 - 2225763 | 12466.7 |
| l-rhamnose isomerase | AMETH_RS10675 | Not Available | Positive | 2225760 - 2226935 | 43267.1 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | AMETH_RS10680 | Not Available | Positive | 2226942 - 2228978 | 71517.0 |
| l-fucose/l-arabinose isomerase family protein | AMETH_RS10685 | Not Available | Positive | 2228998 - 2230419 | 51454.4 |
| rhamnulokinase family protein | AMETH_RS10690 | Not Available | Positive | 2230419 - 2231888 | 51437.8 |
| (fe-s)-binding protein | AMETH_RS10695 | Not Available | Positive | 2231885 - 2232619 | 25991.2 |
| lactate utilization protein b | AMETH_RS10700 | Not Available | Positive | 2232616 - 2234076 | 52651.3 |
| lactate utilization protein c | AMETH_RS10705 | Not Available | Positive | 2234073 - 2234669 | 20763.7 |
| helix-turn-helix domain-containing protein | AMETH_RS10710 | Not Available | Positive | 2234666 - 2234878 | 7778.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
