Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein ecce | AMETH_RS10375 | Not Available | Positive | 2118028 - 2119227 | 42380.1 |
| hypothetical protein | AMETH_RS10380 | Not Available | Positive | 2119224 - 2120273 | 36947.3 |
| hypothetical protein | AMETH_RS10385 | Not Available | Negative | 2120611 - 2121216 | 20186.3 |
| hypothetical protein | AMETH_RS10390 | Not Available | Negative | 2121300 - 2123387 | 72096.2 |
| hypothetical protein | AMETH_RS10395 | Not Available | Negative | 2123394 - 2124467 | 38732.6 |
| type vii secretion protein eccc | AMETH_RS10400 | Not Available | Negative | 2124590 - 2128546 | 143458.0 |
| type vii secretion integral membrane protein eccd | AMETH_RS10405 | Not Available | Positive | 2128667 - 2130067 | 48383.7 |
| type vii secretion protein eccb | AMETH_RS10410 | Not Available | Positive | 2130077 - 2131477 | 47958.4 |
| hypothetical protein | AMETH_RS10415 | Not Available | Positive | 2131648 - 2131977 | 11901.2 |
| wxg100 family type vii secretion target | AMETH_RS10420 | Not Available | Positive | 2132009 - 2132293 | 10470.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
