Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | AMETH_RS10330 | Not Available | Positive | 2109391 - 2110377 | 33986.7 |
| tripartite tricarboxylate transporter tctb family protein | AMETH_RS10335 | Not Available | Positive | 2110374 - 2110901 | 18371.7 |
| tripartite tricarboxylate transporter permease | AMETH_RS10340 | Not Available | Positive | 2110905 - 2112398 | 51952.8 |
| carboxymuconolactone decarboxylase family protein | AMETH_RS10345 | Not Available | Negative | 2112601 - 2112921 | 11413.5 |
| hypothetical protein | AMETH_RS39095 | Not Available | Negative | 2112983 - 2113240 | 8803.32 |
| hypothetical protein | AMETH_RS39100 | Not Available | Positive | 2113509 - 2113700 | 6444.88 |
| tetr/acrr family transcriptional regulator | AMETH_RS10355 | Not Available | Positive | 2113697 - 2114245 | 19734.4 |
| c40 family peptidase | AMETH_RS10360 | Not Available | Negative | 2114221 - 2114652 | 14903.5 |
| biotin-dependent carboxyltransferase family protein | AMETH_RS10365 | Not Available | Negative | 2115584 - 2116459 | 30077.3 |
| sigma-70 family rna polymerase sigma factor | AMETH_RS10370 | Not Available | Negative | 2116877 - 2117797 | 34599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
