Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ywqg family protein | AMETH_RS09750 | Not Available | Positive | 2000370 - 2001263 | 32342.3 |
| serpin family protein | AMETH_RS09755 | Not Available | Positive | 2001357 - 2002469 | 39573.0 |
| glycosyl transferase | AMETH_RS09760 | Not Available | Positive | 2002480 - 2004264 | 64693.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS09765 | Not Available | Negative | 2004261 - 2004704 | 16581.5 |
| mfs transporter | AMETH_RS39795 | Not Available | Positive | 2004769 - 2005260 | 16901.6 |
| hypothetical protein | AMETH_RS39800 | Not Available | Positive | 2005245 - 2005931 | 22723.2 |
| carboxymuconolactone decarboxylase family protein | AMETH_RS09775 | Not Available | Positive | 2005951 - 2006520 | 20967.3 |
| sigma-70 family rna polymerase sigma factor | AMETH_RS09780 | Not Available | Negative | 2006480 - 2007424 | 34168.0 |
| dna primase | AMETH_RS09785 | Not Available | Positive | 2007477 - 2009363 | 68878.1 |
| hypothetical protein | AMETH_RS09790 | Not Available | Positive | 2009367 - 2009888 | 18756.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
