Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMETH_RS08750 | Not Available | Positive | 1792525 - 1793280 | 26084.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS08755 | Not Available | Negative | 1793265 - 1793738 | 18278.8 |
| ycei family protein | AMETH_RS08760 | Not Available | Positive | 1793833 - 1794390 | 19971.2 |
| voc family protein | AMETH_RS08765 | Not Available | Positive | 1794461 - 1794958 | 18453.7 |
| fdhf/ydep family oxidoreductase | AMETH_RS08770 | Not Available | Negative | 1794955 - 1797261 | 84323.0 |
| mfs transporter | AMETH_RS08775 | Not Available | Negative | 1797267 - 1798604 | 45616.9 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS08780 | Not Available | Negative | 1798666 - 1799103 | 15947.1 |
| hypothetical protein | AMETH_RS08785 | Not Available | Negative | 1799144 - 1800118 | 35161.6 |
| valine--trna ligase | AMETH_RS08790 | Not Available | Positive | 1800514 - 1803138 | 97256.0 |
| hypothetical protein | AMETH_RS08800 | Not Available | Negative | 1804050 - 1805339 | 43786.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
