Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease | AMETH_RS08280 | Not Available | Positive | 1688983 - 1690197 | 43296.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AMETH_RS08285 | Not Available | Positive | 1690324 - 1691475 | 40517.0 |
| uma2 family endonuclease | AMETH_RS08290 | Not Available | Positive | 1691559 - 1692131 | 20768.6 |
| arac family transcriptional regulator | AMETH_RS08295 | Not Available | Positive | 1692136 - 1692963 | 29961.7 |
| voc family protein | AMETH_RS08300 | Not Available | Positive | 1692960 - 1693355 | 14244.3 |
| gnat family n-acetyltransferase | AMETH_RS08305 | Not Available | Positive | 1693404 - 1694258 | 30417.6 |
| type i methionyl aminopeptidase | AMETH_RS08310 | Not Available | Positive | 1694304 - 1695161 | 30986.8 |
| fadr/gntr family transcriptional regulator | AMETH_RS08315 | Not Available | Negative | 1695148 - 1695816 | 24013.5 |
| mfs transporter | AMETH_RS08320 | Not Available | Positive | 1695922 - 1697079 | 38938.1 |
| mycothione reductase | AMETH_RS08325 | Not Available | Negative | 1697086 - 1698477 | 49903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
