Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | AMETH_RS08225 | Not Available | Positive | 1680057 - 1680884 | 29552.3 |
| ump kinase | AMETH_RS08230 | Not Available | Positive | 1680989 - 1681738 | 26473.0 |
| ribosome recycling factor | AMETH_RS08235 | Not Available | Positive | 1681783 - 1682340 | 20683.9 |
| phosphatidate cytidylyltransferase | AMETH_RS08240 | Not Available | Positive | 1682341 - 1683222 | 30362.8 |
| voc family protein | AMETH_RS08250 | Not Available | Negative | 1683654 - 1684496 | 30266.4 |
| class i sam-dependent methyltransferase | AMETH_RS08255 | Not Available | Positive | 1684581 - 1685411 | 30334.7 |
| padr family transcriptional regulator | AMETH_RS08260 | Not Available | Negative | 1685360 - 1685806 | 15984.6 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | AMETH_RS08265 | Not Available | Positive | 1686212 - 1687318 | 40070.4 |
| duf2631 domain-containing protein | AMETH_RS08270 | Not Available | Negative | 1687400 - 1687675 | 10072.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AMETH_RS08275 | Not Available | Positive | 1687774 - 1688979 | 42066.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
