Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine dioxygenase family protein | AMETH_RS07685 | Not Available | Positive | 1568262 - 1568726 | 17310.4 |
| ybab/ebfc family nucleoid-associated protein | AMETH_RS07690 | Not Available | Positive | 1568841 - 1569347 | 17990.9 |
| type vii secretion target | AMETH_RS07695 | Not Available | Positive | 1569344 - 1569655 | 10573.4 |
| aaa family atpase | AMETH_RS39725 | Not Available | Negative | 1571767 - 1572468 | 25567.6 |
| short-chain dehydrogenase | AMETH_RS42005 | Not Available | Negative | 1572821 - 1572898 | 2941.69 |
| pyridoxamine 5'-phosphate oxidase family protein | AMETH_RS07710 | Not Available | Negative | 1572908 - 1573555 | 22934.3 |
| plp-dependent aminotransferase family protein | AMETH_RS07715 | Not Available | Positive | 1573627 - 1574997 | 47988.6 |
| d-alanine--d-alanine ligase family protein | AMETH_RS07720 | Not Available | Positive | 1575034 - 1576119 | 38362.7 |
| duf3515 domain-containing protein | AMETH_RS07725 | Not Available | Negative | 1576240 - 1576773 | 18088.0 |
| lrp/asnc ligand binding domain-containing protein | AMETH_RS07730 | Not Available | Negative | 1576777 - 1577010 | 7969.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
