Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate-dependent dioxygenase alkb | AMETH_RS07635 | Not Available | Negative | 1557511 - 1558137 | 22989.4 |
| iclr family transcriptional regulator | AMETH_RS07640 | Not Available | Negative | 1558226 - 1558945 | 25067.0 |
| 3-isopropylmalate dehydratase large subunit | AMETH_RS07645 | Not Available | Positive | 1559074 - 1560489 | 50512.2 |
| 3-isopropylmalate dehydratase small subunit | AMETH_RS07650 | Not Available | Positive | 1560506 - 1561108 | 22381.3 |
| hu family dna-binding protein | AMETH_RS07655 | Not Available | Positive | 1561336 - 1561971 | 21873.2 |
| nudix hydrolase | AMETH_RS07660 | Not Available | Negative | 1562427 - 1563365 | 33302.5 |
| rna degradosome polyphosphate kinase | AMETH_RS07665 | Not Available | Negative | 1563362 - 1565548 | 81324.6 |
| 2-phospho-l-lactate guanylyltransferase | AMETH_RS07670 | Not Available | Negative | 1565665 - 1566303 | 21635.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMETH_RS07675 | Not Available | Positive | 1566373 - 1567074 | 25554.0 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | AMETH_RS07680 | Not Available | Positive | 1567077 - 1568084 | 35005.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
