Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMETH_RS06665 | Not Available | Negative | 1369500 - 1369901 | 14984.8 |
| Trna-arg | Not Available | Not Available | Positive | 1370021 - 1370096 | Not Available |
| cation diffusion facilitator family transporter | AMETH_RS06675 | Not Available | Positive | 1370286 - 1371203 | 32085.3 |
| duf305 domain-containing protein | AMETH_RS06680 | Not Available | Negative | 1371298 - 1372005 | 25083.1 |
| duf3105 domain-containing protein | AMETH_RS06685 | Not Available | Negative | 1372011 - 1372814 | 28002.9 |
| arginine--trna ligase | AMETH_RS06690 | Not Available | Positive | 1372917 - 1374572 | 59496.2 |
| diaminopimelate decarboxylase | AMETH_RS06695 | Not Available | Positive | 1374579 - 1376015 | 51451.9 |
| homoserine dehydrogenase | AMETH_RS06700 | Not Available | Positive | 1376021 - 1377328 | 45184.7 |
| threonine synthase | AMETH_RS06705 | Not Available | Positive | 1377325 - 1378389 | 36082.3 |
| homoserine kinase | AMETH_RS06710 | Not Available | Positive | 1378386 - 1379267 | 30030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
