Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | AMETH_RS06580 | Not Available | Negative | 1354094 - 1354918 | 29408.0 |
| non-homologous end-joining dna ligase | AMETH_RS06585 | Not Available | Positive | 1355067 - 1355996 | 33959.3 |
| yidh family protein | AMETH_RS06590 | Not Available | Positive | 1356007 - 1356363 | 13033.2 |
| duf202 domain-containing protein | AMETH_RS06595 | Not Available | Positive | 1356360 - 1356644 | 9510.97 |
| plp-dependent aminotransferase family protein | AMETH_RS06600 | Not Available | Negative | 1356613 - 1358016 | 50248.5 |
| hypothetical protein | AMETH_RS06605 | Not Available | Positive | 1358168 - 1358710 | 19707.3 |
| formaldehyde dehydrogenase, glutathione-independent | AMETH_RS06610 | Not Available | Positive | 1359163 - 1360383 | 42629.9 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | AMETH_RS39705 | Not Available | Negative | 1360426 - 1360734 | 11103.2 |
| lyse family translocator | AMETH_RS06620 | Not Available | Negative | 1360731 - 1361330 | 20970.2 |
| plp-dependent aminotransferase family protein | AMETH_RS06625 | Not Available | Positive | 1361359 - 1362813 | 51948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
